Dec. 16, 2019
The plugin is write from informations get in FibrilTool by Arezki Boudaoud et al. Nature Protocols. A Results tab gives the average properties of each region scanned in open image
-x,y coordinates of region centroid
-nematic tensor average orientation (angle in range -90:90 in degrees)
-quality of the orientation (score between 0 and 1)
Results : An overlay with a colored line on each region is shown on original image, a plot of orientations distribution and a "Results" table with orientation angles and a quality parameter.